Brachypodium Genomics

Methods for Cytogenetic Chromosome Barcoding and Chromosome Painting in Brachypodium distachyon and its Relative Species.- Transcriptional and Post-Transcriptional Regulation of Drought Stress Treatments in Brachypodium Leaves.- Brachypodium distachyon Long Non-Coding RNAs: Genome-Wide Identification and Expression Analysis.- A Highly Efficient and Reproducible Fusarium spp. Inoculation Method for Brachypodium distachyon.- Tissue Culture (Somatic Embryogenesis) Induced Tnt1 Retrotransposon Based Mutagensis in Brachypodium Distrachyon.- Methods for Xyloglucan Structure Analysis in Brachypodium.- Genomic Approaches to Analyze Alternative Splicing: A Key Regulator of Transcriptome and Proteome Diversity in Brachypodium distachyon.- Information Resources for Functional genomics Studies in Brachypodium distachyon.- Methods for Functional Transgenics: Development of Highly Efficient Transformation Protocol in Brachypodium and its Suitability for Advancing Brachypodium Transgenics.- Molecular Markers in Whole Genome Evolution of Brachypodium.- Estimate Condom Usage Bias using Condon Usage Analyzer (CUA).- Identification of Pseudogenes in Brachypodium distachyon Chromosomes.- TILLING in Brachypodium distachyon.- Method for the Large Scale Identification of PhasiRNAs in Brachypodium distachyon.- Evaluation of Genome Wide Markers and Orthologous Markers in Brachypodium distachyon.- Protocol for Co-Expression Network Construction and Stress-Responsive Expression Analysis in Brachypodium.- Whole Genome DNA Methylation Analysis using Next-General Sequencing (BS-Seq).- Application of Tissue Culture and Transformation Techniques in Model Species, Brachypodium Distachyon.