Medical Optical Imaging and Virtual Microscopy Image Analysis

Cell counting with inverse distance kernel and self-supervised learning.- Predicting the visual attention of pathologists evaluating whole slide images of cancer.- Edge-Based Self-Supervision for Semi-Supervised Few-Shot Microscopy Image Cell Segmentation.- Joint Denoising and Super-resolution for Fluorescence Microscopy using Weakly-supervised Deep Learning.- MxIF Q-score: Biology-informed Quality Assurance for Multiplexed Immunofluorescence Imaging.- A Pathologist-Informed Workflow for Classification of Prostate Glands in Histopathology.- Leukocyte Classification using Multimodal Architecture Enhanced by Knowledge Distillation.- Deep learning on lossily compressed pathology images: adverse effects for ImageNet pre-trained models.- Profiling DNA damage in 3D Histology Samples.- Few-shot segmentation of microscopy images using Gaussian process.- Adversarial Stain Transfer to Study the Effect of Color Variation on Cell Instance Segmentation.- Constrained self-supervised method with temporal ensembling for  fiber bundle detection on anatomic tracing data.- Sequential multi-task learning for histopathology-based prediction of genetic mutations with extremely imbalanced labels.- Morph-Net: End-to-End Prediction of Nuclear Morphological Features from Histology Images.- A Light-weight Interpretable Model for Nuclei Detection and Weakly-supervised Segmentation.- A coarse-to-fine segmentation methodology based on deep networks for automated analysis of Cryptosporidium parasite from fluorescence microscopic images.- Swin Faster R-CNN for Senescence Detection of Mesenchymal Stem Cells in Bright-field Images.- Characterizing Continual Learning Scenarios for Tumor Classification in Histopathology Images.